Universität Leipzig
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Item Open Access 3D-Model Toro Farnese (Plaster Cast Antikenmuseum, Leipzig University)(Universität Leipzig, 2025-11-17) Lang, JörnAssembled digital single models (54) of the cast of the Farnese Bull in the Museum of Antiquities at Leipzig University, including one missing part (marked in red).Item Open Access 3D-Model Toro Farnese (Research version)(Universität Leipzig, 2025-11-17) Lang, JörnThe research model is based on the documentation model. It has been cleaned up to remove elements of the sculpture group that, according to research, did not belong to the original Greek model on which the Roman copy in Naples was based.Item Open Access A New Risk Assessment Model for Unexploded underwater Military Munitions: Application Data(Universität Leipzig, 2025-03-03) Frey, TorstenThis file contains application demonstration data from the following doctoral thesis: Frey, Torsten. A New Risk Assessment Model for Unexploded underwater Military Munitions. Dissertation. Leipzig University. Leipzig. 2025. https://doi.org/10.5281/zenodo.14620239. For detailed information, the interested party is referred to section 6.3 of the dissertation.Item Open Access A New Risk Assessment Model for Unexploded underwater Military Munitions: Monte Carlo Simulation(Universität Leipzig, 2025-02-25) Frey, TorstenThis file contains monte carlo simulation data from the following doctoral thesis: Frey, Torsten. A New Risk Assessment Model for Unexploded underwater Military Munitions. Dissertation. Leipzig University. Leipzig. 2025. https://doi.org/10.5281/zenodo.14620239. For detailed information, the interested party is referred to section 6.2 and Appendix 10 of the dissertation.Item Open Access A New Risk Assessment Model for Unexploded underwater Military Munitions: Sensitivity Analysis(Universität Leipzig, 2025-02-04) Frey, TorstenThis file contains sensitivity analysis data to the following doctoral thesis: Frey, Torsten. A New Risk Assessment Model for Unexploded underwater Military Munitions. Dissertation. Leipzig University. Leipzig. 2025. DOI: 10.5281/zenodo.14620239. For detailed information, the interested party is referred to section 6.1 and Appendix 9 of the dissertation.Item Open Access A New Risk Assessment Model for Unexploded underwater Military Munitions: Workshop 1 Poll Results(Universität Leipzig, 2025-03-03) Frey, TorstenThis file contains workshop poll data from the following doctoral thesis: Frey, Torsten. A New Risk Assessment Model for Unexploded underwater Military Munitions. Dissertation. Leipzig University. Leipzig. 2025. https://doi.org/10.5281/zenodo.14620239. For detailed information, the interested party is referred to Appendices 3 and 4 of the dissertation.Item Open Access A New Risk Assessment Model for Unexploded underwater Military Munitions: Workshop 2 Poll Results(Universität Leipzig, 2025-03-03) Frey, TorstenThis file contains workshop poll data from the following doctoral thesis: Frey, Torsten. A New Risk Assessment Model for Unexploded underwater Military Munitions. Dissertation. Leipzig University. Leipzig. 2025. https://doi.org/10.5281/zenodo.14620239. For detailed information, the interested party is referred to Appendices 6, 7, and 8 of the dissertation.Item Open Access Adipic acid concentrations from biotransformation by rec. Pseudomonas taiwanensis(Universität Leipzig, 2025-02-05) Franz, AlexanderThe dataset belongs to a publication in Green Chemistry from 2023 (DOI: 10.1039/d3gc01105d). In the publication a two-step process is demonstrated, in which phenolic compounds are electrochemically hydrogenated and further converted to adipic acid by a biotransformation of recombinant Pseudomonas taiwanensis. The dataset shows the data from Fig. 3c and 4c in the publication. The two tables show the adipic acid concentration over time in the 500 mL-bubble column reactors, in which the biocatalyst was fed with the substrate solution.Item Open Access BiSID-5k: A Bimodal Image Dataset for Seed Classification from the Visible and Near-Infrared Spectrum(Universität Leipzig, 2025-04-10) Kukushkin, Maksim; Bogdan, Martin; Goertz, Simon; Callsen, Jan-Ole; Oldenburg, Eric; Enders, Matthias; Schmid, ThomasThe success of deep learning in image classification has been largely underpinned by large-scale datasets, such as ImageNet, which have significantly advanced multi-class classification for RGB and grayscale images. However, datasets that capture spectral information beyond the visible spectrum remain scarce, despite their high potential, especially in agriculture, medicine, and remote sensing. To address this gap in the agricultural domain, we present BiSID-5k, a thoroughly curated bimodal seed image dataset comprising paired RGB and hyperspectral images for 10 plant species, making it one of the largest bimodal seed datasets available. We describe the methodology for data collection and preprocessing and benchmark several deep learning models on the dataset to evaluate their multi-class classification performance. By contributing a high-quality dataset, BiSID-5k offers a valuable resource for studying spectral, spatial, and morphological properties of seeds, opening new avenues for research and applications.Item Open Access Dataset for "Targeted, receptor-mediated delivery of a masked ᴅ-amino acid cell penetrating peptide for cell-specific phototoxicity"(Universität Leipzig, 2025-11-06) List, Moritz; Jülke, Eva-Maria; Beck-Sickinger, Annette G.Photodynamic therapy is an innovative treatment option for cancer, but current approaches are limited by poor tumor selectivity and low uptake. Here, we introduce a novel concept for a targeted phototoxic peptide, in which a lysosomally activatable payload is delivered selectively by receptor-mediated endocytosis. For the payload, 6-carboxytetramethylrhodamine (TMR) was attached to an activatable cell penetrating peptide. The regular activity of the CPP was blocked by electrostatic interactions with a poly-glutamate sequence but could be restored through cleavage by the lysosomal protease cathepsin B both in vitro and in cells. The unmasked CPP can then bind to the negatively charged lysosomal membrane, and upon irradiation, TMR generates reactive oxygen species (ROS) that disrupt the integrity of the membrane. This leads to a release of lysosomal contents into the cytosol which subsequently induces cell death. To achieve targeted delivery, the activatable payload was conjugated to chemerin-9, a high-affinity ligand for the chemokine-like receptor 1 (CMKLR1), a G protein-coupled receptor overexpressed in various cancers. Through this receptor-targeted approach, the peptide accumulates in CMKLR1-expressing cells while the lysosomal activation completely prevented off-target toxicity. Notably, this strategy enables even a weak photosensitizer like TMR to achieve potent cytotoxicity through lysosomal targeting. This approach represents an advancement in improving the selectivity and efficacy of photodynamic therapy and holds promise for the development of novel cancer therapies. Furthermore, the concept opens possibilities for specific intracellular delivery of peptides or proteins.Item Open Access Dataset Validation Study ILEA-Basis-T(Universität Leipzig, 2025-03-05) Liebers, Katrin; Siegemund-Johannsen, Steffen; Viernickel, Susanne; Redersborg, Helke; von Seeler, Isabelle; Richter, Virginia; Hartke, Sara; Kauffert, MatteoThe validation study was conducted to statistically test the validity of the developed DBS. Accordingly, the materials that had been developed for the DBS over the course of the project and had already been tested were used. The parents of all participating children gave their consent. The research ethical standards were adhered to. Likewise, a positive vote of the ethics committee of the University of Leipzig was available. At the same time, further domain-specific test procedures were used to determine convergent and discriminant validity in the areas of early literacy and early mathematics (e.g. MBK 0, Krajewski, 2018; GISC-EL, Koch, Euker & Kuhl, 2016). In addition, a comprehensive rating-based evaluation form was developed for the Early Mathematics Observation Form, with a focus on suitability for everyday use and acceptance in practice. The observation procedures for well-being and the children's questionnaire on well-being were used by project staff, students, and preschool teachers. Convergent discrimination for the habitual well-being rating procedure was determined using a selection of parallel assessment methods (excerpts from KOMPIK; Mayr, Bauer, Krause, Kruse, & Schnirch, 2014; Leiden Inventory for the Child's Wellbeing in Day Care/LICW-D; De Schipper, Van IJzendoorn, & Tavecchio, 2004).Item Open Access DeepExtremeCubes(Universität Leipzig, 2024-12-19) Ji, Chaonan; Fincke, Tonio; Benson, Vitus; Camps-Valls, Gustau; Fernández-Torres, Miguel-Ángel; Gans, Fabian; Kraemer, Guido; Martinuzzi, Francesco; Montero, David; Mora, Karin; Pellicer-Valero, Oscar; Robin, Claire; Söchting, Maximilian; Weynants, Melanie; Mahecha, MiguelWith climate extremes' rising frequency and intensity, robust analytical tools are crucial to predict their impacts on terrestrial ecosystems. Machine learning techniques show promise but require well-structured, high-quality, and curated analysis-ready datasets. Earth observation datasets comprehensively monitor ecosystem dynamics and responses to climatic extremes, yet the data complexity can challenge the effectiveness of machine learning models. Despite recent progress in deep learning to ecosystem monitoring, there is a need for datasets specifically designed to analyse compound heatwave and drought extreme impact. Here, we introduce the DeepExtremeCubes database, tailored to map around these extremes, focusing on persistent natural vegetation. It comprises over 40,000 globally sampled small data cubes (i.e. minicubes), with a spatial coverage of 2.5 by 2.5 km. Each minicube includes (i) Sentinel-2 L2A images, (ii) ERA5-Land variables and generated extreme event cube covering 2016 to 2022, and (iii) ancillary land cover and topography maps. The paper aims to (1) streamline data accessibility, structuring, pre-processing, and enhance scientific reproducibility, and (2) facilitate biosphere dynamics forecasting in response to compound extremes.Item Open Access Earthquakes in Saxony (Germany) and surroundings from 2006 up to 2023 -- onsets and locations(Universität Leipzig, 2025-04-04) Wendt, SiegfriedThis archive contains complete results of earthquake locations for Saxony (Germany) and neighbourhood of the years from 2006 up to 2023. Approximately 26.000 events were detected and localized, most of them with epicenters in Northwestern Bohemia near Nový Kostel and Luby (Czech Republic) neighboured to the Saxon border.Item Open Access Farnesischer Stier - Bodenplatte unter Amphion, Universität Leipzig, Antikenmuseum, G 661 - TF 1, high-poly(Universität Leipzig, 2025-12-02) Michalski, Paula; Apelt, JoanaDieser Datensatz enthält das High-Poly-Modell der Bodenplatte unter Amphion aus der Gipsabformung der Skulpturengruppe des Farnesischen Stiers, die sich im Antikenmuseum der Universität Leipzig (Inventarnummer G 661, TF 1) befindet. Das 3D-Modell basiert auf den hochaufgelösten Rohdaten und wurde durch Polygonreduktion optimiert. Dabei blieb die geometrische und visuelle Qualität erhalten, während die Dateigröße deutlich reduziert wurde.Item Open Access Forschungsdaten zur Dissertation: Konzeption eines fachdidaktischen Patternmodells für den Informatikunterricht(Universität Leipzig, 2025-06-19) Kießling, PeterDiese Datenpublikation umfasst die im Rahmen der Dissertation „Konzeption eines fachdidaktischen Patternmodells des Informatikunterrichts in den Dimensionen Inhalt, Methode und Medium“ (Kießling, 2025, Universität Leipzig) erhobenen Forschungsdaten. Enthalten sind anonymisierte Daten der Vorstudie (Phasen I und II), der Hauptstudie sowie der explorativen Wirksamkeitsanalyse. Darüber hinaus beinhaltet die Publikation eine Demoversion des im Forschungsprozess entwickelten IML-Modells.Item Open Access Guidelines for quantitative survey on perception of urban green spaces during COVID-19 pandemic(Universität Leipzig, 2024-03-22) Hübscher, MarcusThis is the survey guideline used for the quantitative survey.Item Open Access Optoacoustic Imaging in Lower Extremity Revascularization: A Novel Technique to Assess Perioperative Muscle Perfusion(Universität Leipzig, 2025-06-10) Winther, BirteThis Excel sheet contains perfusion measurements acquired using Multispectral Optoacoustic Tomography (MSOT) from a cohort of 26 patients undergoing lower extremity revascularization. Measurements were taken at three time points: before the procedure (pre), immediately after the procedure (post), and before hospital discharge (disch). For each patient (identified by a pseudonym in the leftmost column), multiple oxygenation-related parameters were recorded at various wavelengths, targeting three anatomical regions of interest: Tibialis Anterior Muscle – Proximal (TAP), Tibialis Anterior Muscle – Medial (TAM), and Flexor Hallucis Brevis Muscle (FH).Item Open Access Parameters Tested for VNA validation(Universität Leipzig, 2025-12-03) Harzer, MaxiFive key protocol variables were systematically assessed: (i) the applied trypsin concentration, (ii) the incubation time for proteolytic activation of the RV, (iii) the infection dose applied, (iv) the duration of neutralization time and (v) sample-specific factors that affect assay performance. Furthermore, correlation studies was done between several sample materials and Virus neutralization (VNA) and immunofourescence assay titers. Moreover the sensitivity limit and the linearity of the VNA was determined as well as intra- and inter-assay repeatability.Item Open Access Supplemental material for the publication "Children born SGA receiving growth hormone have similarly impaired glucose-insulin metabolism as children with obesity"(Universität Leipzig, 2025-12-02) Prengemann, Lea; Stein, Robert; Gausche, Ruth; Beger, Christoph; Vogel, Mandy; Wenzel, Eric; Stoltze, Anette; Kiess, Wieland; Pfäffle, Roland; Körner, AntjeBackground and Objectives: Being born small for gestational age (SGA) and growth hormone (GH) treatment are linked to disturbed glucose-insulin metabolism. We investigated how GH treatment affects glucose-insulin metabolism in children born SGA compared to children with isolated growth-hormone deficiency (iGHD), obesity and lean controls. Methods: We analyzed glucose-insulin metabolism indices derived from OGTTs (Matsuda index, AUC insulin) and fasting parameters (fasting glucose, HOMA-IR) in 134 SGA patients without catch-up growth (CUG) receiving GH therapy (SGA-GHT), 27 untreated SGA patients with catch-up growth (SGA-CUG), 308 iGHD patients under GH treatment, 427 children with obesity and 356 lean controls. We adjusted for sex, age and BMI through matching and multivariable regression. Results: Treatment-naïve SGA-GHT patients were more insulin-resistant than iGHD patients (higher insulin AUC (p=0.002) and HOMA-IR (p<0.001), lower Matsuda index (p<0.001)) with levels approaching those of the obesity cohort. Under GH therapy, HbA1c was higher in SGA-GHT and iGHD patients (5.26%±0.35 vs. 5.25%±0.25) than in lean controls (5.09%±0.27). Insulin resistance in SGA-GHT patients approached levels seen in obesity. The prevalence of prediabetes was highest in SGA-GHT children (11.11%) compared to those with iGHD (1.59%) or obesity (3.13%). After stopping GH therapy, SGA-GHT patients retained elevated markers of prediabetes (4.65%) and insulin resistance compared to controls and iGHD patients, similar to children with obesity (6.38%). No overt type 2 diabetes was observed. Conclusion: SGA patients have an impaired glucose-insulin metabolism similar to that of children with obesity, which worsens under GH therapy. Close metabolic monitoring of GH-treated SGA patients is recommended.Item Open Access Supplementary data for: Weighted Shapley values and allocation of portfolio risk: One approach to solve the low-risk puzzle?(Universität Leipzig, 2025-11-05) Hiller, TobiasThe data set contains data for the article “Weighted Shapley values and allocation of portfolio risk: One approach to solve the low-risk puzzle?”. This includes a description of the simulation settings, the Excel macros for calculating the results in the case of equal shares and random asset shares, and the 100,000 simulation results for both cases in Excel. Abstract of the paper: In this article, we extend the application of cooperative game theory to solve the so-called low-risk puzzle. Specifically, we apply concepts that consider asset weights in the allocation of portfolio risk. These weights can take into account various asset characteristics (e.g., image, popularity of an asset, corporate social responsibility, innovative strength) that have not been previously considered in portfolio risk allocation using cooperative game theory. We demonstrate the application through a simulation study. Our results show that considering assets weights could deliver added value when solving the low-risk puzzle.
